chore: change run command, remove workspace cli argument

README.md

@@ -42,7 +42,7 @@ mkdir -p ~/.nanobot
 **2. Chat**
 
 ```bash
-bun run start agent
+bun run nanobot agent
 ```
 
 That's it.
@@ -54,22 +54,21 @@ That's it.
 Chat with the agent from your terminal. Does not require a running gateway.
 
 ```
-bun run start agent [options]
+bun run nanobot agent [options]
 ```
 
 | Option | Description |
 |--------|-------------|
 | `-c, --config <path>` | Path to `config.json` (default: `~/.nanobot/config.json`) |
 | `-m, --message <text>` | Send a single message and exit (non-interactive) |
-| `-w, --workspace <path>` | Override the workspace directory |
 | `-M, --model <model>` | Override the model for this session |
 
 **Interactive mode** (default when no `-m` is given):
 
 ```bash
-bun run start agent
+bun run nanobot agent
-bun run start agent -c ~/.nanobot-work/config.json
+bun run nanobot agent -c ~/.nanobot-work/config.json
-bun run start agent -w /tmp/scratch
+bun run nanobot agent -w /tmp/scratch
 ```
 
 Press `Ctrl+C` to exit.
@@ -77,8 +76,8 @@ Press `Ctrl+C` to exit.
 **Single-shot mode:**
 
 ```bash
-bun run start agent -m "What time is it in Tokyo?"
+bun run nanobot agent -m "What time is it in Tokyo?"
-bun run start agent -m "Summarize the file ./notes.md"
+bun run nanobot agent -m "Summarize the file ./notes.md"
 ```
 
 ### `gateway` — Mattermost bot
@@ -86,7 +85,7 @@ bun run start agent -m "Summarize the file ./notes.md"
 Runs the full stack: Mattermost WebSocket channel, agent loop, cron scheduler, and heartbeat.
 
 ```
-bun run start gateway [options]
+bun run nanobot gateway [options]
 ```
 
 | Option | Description |
@@ -94,8 +93,8 @@ bun run start gateway [options]
 | `-c, --config <path>` | Path to `config.json` (default: `~/.nanobot/config.json`) |
 
 ```bash
-bun run start gateway
+bun run nanobot gateway
-bun run start gateway -c ~/.nanobot-work/config.json
+bun run nanobot gateway -c ~/.nanobot-work/config.json
 ```
 
 Handles `SIGINT` / `SIGTERM` for graceful shutdown.
@@ -110,7 +109,6 @@ Environment variable overrides:
 |----------|-------------------|
 | `NANOBOT_CONFIG` | path to config file |
 | `NANOBOT_MODEL` | `agent.model` |
-| `NANOBOT_WORKSPACE` | `agent.workspacePath` |
 
 ### Full config reference
 
@@ -198,7 +196,7 @@ For Ollama, set `providers.ollama.apiBase` (default: `http://localhost:11434/api
 }
 ```
 
-4. Run `bun run start gateway`
+4. Run `bun run nanobot gateway`
 
 `allowFrom` controls which users the bot responds to. Use `["*"]` to allow all users.
 
@@ -233,10 +231,10 @@ Run separate instances with different configs — useful for isolated workspaces
 
 ```bash
 # Instance A
-bun run start gateway -c ~/.nanobot-a/config.json
+bun run nanobot gateway -c ~/.nanobot-a/config.json
 
 # Instance B
-bun run start gateway -c ~/.nanobot-b/config.json
+bun run nanobot gateway -c ~/.nanobot-b/config.json
 ```
 
 Each instance needs its own config file. Set a different `agent.workspacePath` per instance to keep memory, sessions, and cron jobs isolated:
@@ -252,10 +250,10 @@ Each instance needs its own config file. Set a different `agent.workspacePath` p
 To run a local CLI session against a specific instance:
 
 ```bash
-bun run start agent -c ~/.nanobot-a/config.json -m "Hello"
+bun run nanobot agent -c ~/.nanobot-a/config.json -m "Hello"
 
 # Temporarily override the workspace for a one-off run
-bun run start agent -c ~/.nanobot-a/config.json -w /tmp/scratch
+bun run nanobot agent -c ~/.nanobot-a/config.json -w /tmp/scratch
 ```
 
 ## Linux service (systemd)

memory-bank/systemPatterns.md

@@ -49,6 +49,28 @@ Inbound and outbound messages are passed through a typed `AsyncQueue<T>`. The qu
 ## Logging Pattern
 Use `console.error` / `console.warn` / `console.info` / `console.debug` — no external logger. Color via `picocolors` in CLI output only.
 
+## CLI Command Pattern
+Each command is in its own file with a registration function:
+```ts
+// src/cli/agent.ts
+export function agentCommand(program: Command, config: Config, workspace: string): void {
+  program.command('agent')
+    .description('...')
+    .option('-m, --message <text>', 'Single message to process')
+    .action(async (opts) => { /* ... */ })
+}
+
+// src/cli/commands.ts (bootstrap)
+export function createCli(): Command {
+  const program = new Command('nanobot')...
+  const config = loadConfig(opts.config);
+  const workspace = resolveWorkspacePath(config.agent.workspacePath);
+  gatewayCommand(program, config, workspace);
+  agentCommand(program, config, workspace);
+  return program;
+}
+```
+
 ## File Layout
 ```
 src/
@@ -67,8 +89,12 @@ src/
     tools/base.ts + filesystem.ts + shell.ts + web.ts + message.ts + spawn.ts + cron.ts
   channels/
     base.ts + mattermost.ts + manager.ts
-  cli/commands.ts
+  cli/
-index.ts
+    types.ts       # CommandHandler type
+    commands.ts    # Bootstrap - loads config, registers commands
+    agent.ts       # agentCommand() - interactive/single-shot mode
+    gateway.ts     # gatewayCommand() - full runtime with Mattermost
+  index.ts
 templates/   (SOUL.md, AGENTS.md, USER.md, TOOLS.md, HEARTBEAT.md, memory/MEMORY.md)
 skills/      (copied from Python repo)
 ```

package.json

@@ -4,7 +4,7 @@
   "type": "module",
   "module": "index.ts",
   "scripts": {
-    "start": "bun run index.ts",
+    "nanobot": "bun run index.ts",
     "dev": "bun --watch run index.ts",
     "typecheck": "tsc --noEmit",
     "fmt": "oxfmt --check",

src/cli/agent.ts

@@ -0,0 +1,85 @@
+import { createInterface } from 'node:readline';
+import { Command } from 'commander';
+import pc from 'picocolors';
+import { AgentLoop } from '../agent/loop.ts';
+import { MessageBus } from '../bus/queue.ts';
+import type { Config } from '../config/types.ts';
+import { makeProvider } from '../provider/index.ts';
+
+export function agentCommand(program: Command, config: Config, workspace: string): void {
+  program
+    .command('agent')
+    .description('Run the agent interactively or send a single message.')
+    .option('-m, --message <text>', 'Single message to process (non-interactive)')
+    .option('-M, --model <model>', 'Model override')
+    .action(async (opts: { config?: string; message?: string; model?: string }) => {
+      const model = opts.model ?? config.agent.model;
+      const provider = makeProvider(
+        config.providers,
+        model,
+        config.agent.maxTokens,
+        config.agent.temperature,
+      );
+      const bus = new MessageBus();
+
+      const agentLoop = new AgentLoop({
+        bus,
+        provider,
+        workspace,
+        model,
+        maxIterations: config.agent.maxToolIterations,
+        contextWindowTokens: config.agent.contextWindowTokens,
+        braveApiKey: config.tools.web.braveApiKey,
+        webProxy: config.tools.web.proxy,
+        execConfig: config.tools.exec,
+        restrictToWorkspace: config.tools.restrictToWorkspace,
+      });
+
+      // Single-shot mode
+      if (opts.message) {
+        const result = await agentLoop.processDirect(opts.message);
+        console.log(result);
+        return;
+      }
+
+      // Interactive mode
+      console.info(pc.green('nanobot interactive mode. Type your message, Ctrl+C to exit.'));
+
+      const rl = createInterface({ input: process.stdin, output: process.stdout });
+
+      const promptUser = () => {
+        rl.question(pc.cyan('You: '), async (input) => {
+          const text = input.trim();
+          if (!text) {
+            promptUser();
+            return;
+          }
+
+          const onProgress = async (content: string, opts?: { toolHint?: boolean }) => {
+            if (opts?.toolHint) {
+              process.stdout.write(pc.dim(`  [${content}]\n`));
+            } else {
+              process.stdout.write(pc.dim(`  ${content}\n`));
+            }
+          };
+
+          const result = await agentLoop.processDirect(
+            text,
+            'cli:interactive',
+            'cli',
+            'interactive',
+            onProgress,
+          );
+          console.log(pc.bold('Bot:'), result);
+          promptUser();
+        });
+      };
+
+      rl.on('close', () => {
+        agentLoop.stop();
+        process.exit(0);
+      });
+
+      promptUser();
+    });
+}

src/cli/commands.ts

@@ -1,178 +1,25 @@
 import { mkdirSync } from 'node:fs';
-import { createInterface } from 'node:readline';
 import { Command } from 'commander';
-import pc from 'picocolors';
-import { AgentLoop } from '../agent/loop.ts';
-import { MessageBus } from '../bus/queue.ts';
-import { MattermostChannel } from '../channels/mattermost.ts';
-import { ChannelManager } from '../channels/manager.ts';
 import { loadConfig, resolveWorkspacePath } from '../config/loader.ts';
-import { CronService } from '../cron/service.ts';
+import { agentCommand } from './agent.ts';
-import { HeartbeatService } from '../heartbeat/service.ts';
+import { gatewayCommand } from './gateway.ts';
-import { makeProvider } from '../provider/index.ts';
+import pc from 'picocolors';
 
 export function createCli(): Command {
-  const program = new Command('nanobot').description('nanobot — personal AI assistant').version('1.0.0');
+  const program = new Command('nanobot')
-
+    .description('nanobot — personal AI assistant')
-  // ---------------------------------------------------------------------------
-  // gateway — full runtime: Mattermost + cron + heartbeat
-  // ---------------------------------------------------------------------------
-  program
-    .command('gateway')
-    .description('Start the full gateway: Mattermost channel, agent loop, cron, and heartbeat.')
     .option('-c, --config <path>', 'Path to config.json')
-    .action(async (opts: { config?: string }) => {
+    .version('1.0.0');
-      const config = loadConfig(opts.config);
+
+  const globalOpts = program.opts();
+  const config = loadConfig(globalOpts.config);
   const workspace = resolveWorkspacePath(config.agent.workspacePath);
+
+  console.info(pc.magenta(`workspace path: ${workspace}`));
   mkdirSync(workspace, { recursive: true });
 
-      const provider = makeProvider(config.providers, config.agent.model, config.agent.maxTokens, config.agent.temperature);
+  gatewayCommand(program, config, workspace);
-      const bus = new MessageBus();
+  agentCommand(program, config, workspace);
-      const channelManager = new ChannelManager(bus);
-
-      // Cron service
-      const cronService = new CronService(workspace, async (job) => {
-        bus.publishInbound({
-          channel: 'system',
-          senderId: 'cron',
-          chatId: `cli:cron_${job.id}`,
-          content: job.payload.message || `Cron job "${job.name}" triggered.`,
-          metadata: { cronJobId: job.id },
-        });
-      });
-
-      const agentLoop = new AgentLoop({
-        bus,
-        provider,
-        workspace,
-        model: config.agent.model,
-        maxIterations: config.agent.maxToolIterations,
-        contextWindowTokens: config.agent.contextWindowTokens,
-        braveApiKey: config.tools.web.braveApiKey,
-        webProxy: config.tools.web.proxy,
-        execConfig: config.tools.exec,
-        cronService,
-        restrictToWorkspace: config.tools.restrictToWorkspace,
-        sendProgress: config.channels.sendProgress,
-        sendToolHints: config.channels.sendToolHints,
-      });
-
-      // Mattermost
-      if (config.channels.mattermost) {
-        const mm = new MattermostChannel(bus, config.channels.mattermost);
-        channelManager.register(mm);
-      } else {
-        console.warn(pc.yellow('[gateway] No Mattermost config found. Running without channels.'));
-      }
-
-      // Heartbeat
-      let heartbeat: HeartbeatService | null = null;
-      if (config.heartbeat.enabled) {
-        heartbeat = new HeartbeatService({
-          workspace,
-          provider,
-          model: config.agent.model,
-          intervalMinutes: config.heartbeat.intervalMinutes,
-          onExecute: async (tasks) => {
-            const content = tasks.length > 0 ? `Heartbeat tasks:\n${tasks.map((t, i) => `${i + 1}. ${t}`).join('\n')}` : 'Heartbeat tick — check for anything to do.';
-            return agentLoop.processDirect(content, 'system:heartbeat', 'system', 'heartbeat');
-          },
-          onNotify: async (_result) => {
-            // Result already delivered via processDirect / message tool
-          },
-        });
-      }
-
-      // Graceful shutdown
-      const shutdown = () => {
-        console.info('\n[gateway] Shutting down...');
-        agentLoop.stop();
-        channelManager.stopAll();
-        heartbeat?.stop();
-        cronService.stop();
-        process.exit(0);
-      };
-      process.on('SIGINT', shutdown);
-      process.on('SIGTERM', shutdown);
-
-      console.info(pc.green('[gateway] Starting...'));
-      cronService.start();
-      heartbeat?.start();
-
-      await Promise.all([agentLoop.run(), channelManager.startAll()]);
-    });
-
-  // ---------------------------------------------------------------------------
-  // agent — interactive CLI or single-shot mode
-  // ---------------------------------------------------------------------------
-  program
-    .command('agent')
-    .description('Run the agent interactively or send a single message.')
-    .option('-c, --config <path>', 'Path to config.json')
-    .option('-m, --message <text>', 'Single message to process (non-interactive)')
-    .option('-w, --workspace <path>', 'Workspace path override')
-    .option('-M, --model <model>', 'Model override')
-    .action(async (opts: { config?: string; message?: string; workspace?: string; model?: string }) => {
-      const config = loadConfig(opts.config);
-      const workspaceRaw = opts.workspace ?? config.agent.workspacePath;
-      const workspace = resolveWorkspacePath(workspaceRaw);
-      mkdirSync(workspace, { recursive: true });
-
-      const model = opts.model ?? config.agent.model;
-      const provider = makeProvider(config.providers, model, config.agent.maxTokens, config.agent.temperature);
-      const bus = new MessageBus();
-
-      const agentLoop = new AgentLoop({
-        bus,
-        provider,
-        workspace,
-        model,
-        maxIterations: config.agent.maxToolIterations,
-        contextWindowTokens: config.agent.contextWindowTokens,
-        braveApiKey: config.tools.web.braveApiKey,
-        webProxy: config.tools.web.proxy,
-        execConfig: config.tools.exec,
-        restrictToWorkspace: config.tools.restrictToWorkspace,
-      });
-
-      // Single-shot mode
-      if (opts.message) {
-        const result = await agentLoop.processDirect(opts.message);
-        console.log(result);
-        return;
-      }
-
-      // Interactive mode
-      console.info(pc.green('nanobot interactive mode. Type your message, Ctrl+C to exit.'));
-
-      const rl = createInterface({ input: process.stdin, output: process.stdout });
-
-      const promptUser = () => {
-        rl.question(pc.cyan('You: '), async (input) => {
-          const text = input.trim();
-          if (!text) { promptUser(); return; }
-
-          const onProgress = async (content: string, opts?: { toolHint?: boolean }) => {
-            if (opts?.toolHint) {
-              process.stdout.write(pc.dim(`  [${content}]\n`));
-            } else {
-              process.stdout.write(pc.dim(`  ${content}\n`));
-            }
-          };
-
-          const result = await agentLoop.processDirect(text, 'cli:interactive', 'cli', 'interactive', onProgress);
-          console.log(pc.bold('Bot:'), result);
-          promptUser();
-        });
-      };
-
-      rl.on('close', () => {
-        agentLoop.stop();
-        process.exit(0);
-      });
-
-      promptUser();
-    });
 
   return program;
 }

src/cli/gateway.ts

@@ -0,0 +1,100 @@
+import { Command } from 'commander';
+import pc from 'picocolors';
+import { AgentLoop } from '../agent/loop.ts';
+import { MessageBus } from '../bus/queue.ts';
+import { MattermostChannel } from '../channels/mattermost.ts';
+import { ChannelManager } from '../channels/manager.ts';
+import type { Config } from '../config/types.ts';
+import { CronService } from '../cron/service.ts';
+import { HeartbeatService } from '../heartbeat/service.ts';
+import { makeProvider } from '../provider/index.ts';
+
+export function gatewayCommand(program: Command, config: Config, workspace: string): void {
+  program
+    .command('gateway')
+    .description('Start the full gateway: Mattermost channel, agent loop, cron, and heartbeat.')
+    .action(async (_opts: { config?: string }) => {
+      const provider = makeProvider(
+        config.providers,
+        config.agent.model,
+        config.agent.maxTokens,
+        config.agent.temperature,
+      );
+      const bus = new MessageBus();
+      const channelManager = new ChannelManager(bus);
+
+      // Cron service
+      const cronService = new CronService(workspace, async (job) => {
+        bus.publishInbound({
+          channel: 'system',
+          senderId: 'cron',
+          chatId: `cli:cron_${job.id}`,
+          content: job.payload.message || `Cron job "${job.name}" triggered.`,
+          metadata: { cronJobId: job.id },
+        });
+      });
+
+      const agentLoop = new AgentLoop({
+        bus,
+        provider,
+        workspace,
+        model: config.agent.model,
+        maxIterations: config.agent.maxToolIterations,
+        contextWindowTokens: config.agent.contextWindowTokens,
+        braveApiKey: config.tools.web.braveApiKey,
+        webProxy: config.tools.web.proxy,
+        execConfig: config.tools.exec,
+        cronService,
+        restrictToWorkspace: config.tools.restrictToWorkspace,
+        sendProgress: config.channels.sendProgress,
+        sendToolHints: config.channels.sendToolHints,
+      });
+
+      // Mattermost
+      if (config.channels.mattermost) {
+        const mm = new MattermostChannel(bus, config.channels.mattermost);
+        channelManager.register(mm);
+      } else {
+        console.warn(pc.yellow('[gateway] No Mattermost config found. Running without channels.'));
+      }
+
+      // Heartbeat
+      let heartbeat: HeartbeatService | null = null;
+      if (config.heartbeat.enabled) {
+        heartbeat = new HeartbeatService({
+          workspace,
+          provider,
+          model: config.agent.model,
+          intervalMinutes: config.heartbeat.intervalMinutes,
+          onExecute: async (tasks) => {
+            const content =
+              tasks.length > 0
+                ? `Heartbeat tasks:\n${tasks.map((t, i) => `${i + 1}. ${t}`).join('\n')}`
+                : 'Heartbeat tick — check for anything to do.';
+            return agentLoop.processDirect(content, 'system:heartbeat', 'system', 'heartbeat');
+          },
+          onNotify: async (_result) => {
+            // Result already delivered via processDirect / message tool
+          },
+        });
+      }
+
+      // Graceful shutdown
+      const shutdown = () => {
+        console.info('\n[gateway] Shutting down...');
+        agentLoop.stop();
+        channelManager.stopAll();
+        heartbeat?.stop();
+        cronService.stop();
+        process.exit(0);
+      };
+      process.on('SIGINT', shutdown);
+      process.on('SIGTERM', shutdown);
+
+      console.info(pc.green('[gateway] Starting...'));
+      cronService.start();
+      heartbeat?.start();
+
+      await Promise.all([agentLoop.run(), channelManager.startAll()]);
+    });
+}

src/cli/types.ts

@@ -0,0 +1,4 @@
+import type { Command } from 'commander';
+import type { Config } from '../config/types.ts';
+
+export type CommandHandler = (program: Command, config: Config, workspace: string) => void;